Publications
Peer-reviewed publications:
- Chaudhary, P.M. and Roninson, I.B. (1991). Expression and activity of P-glycoprotein, a multidrug efflux pump, in human hematopoietic stem cells. Cell 66, 85-94. [831 citations]
- Chaudhary, P.M., Mechetner, E.B., and Roninson, I .B. (1992). Expression and activity of the multidrug resistance P-glycoprotein in human peripheral blood lymphocytes. Blood 80, 2735- 2739. [332 citations]
- Chaudhary, P. M. and Roninson, I.B. (1992). Activation of MDR1 (P-glycoprotein) gene expression in human cells by protein kinase C agonists. Oncology Research 4, 281-290. [129 citations]
- Chaudhary, P.M. and Roninson, I.B. (1993). Induction of multidrug resistance in human cells by transient exposure to different chemotherapeutic drugs. J. Natl. Canc. Inst. 85, 632-639.[307 citations]
- Han, D.K.*, Chaudhary, P.M.,* Wright, M.E., Friedman, C., Trask, B.J., Riedel R.T., Baskin, D.G., Schwartz, S.M., and Hood, L. (1997). MRIT, a novel death-effector domain-containing protein, interacts with caspases and BclXL and initiates cell death. Proc Natl Acad Sci USA 1 4, 94(21):1133311338. * Co-first authors. [197 citations]
- Chaudhary, P.M., Eby, M., Jasmin, A., Bookwalter, A., Murray, J., and Hood, L. (1997). Death Receptor 5, a new member of the TNFR family, and DR4 induce FADD-dependent apoptosis and activate the NF-κB pathway. Immunity 7 (6) 821-830. [475 citations]
- Chaudhary, P.M., Ferguson, C., Nguyen, V., Nguyen, O., Massa., H.F., Eby, M., Jasmin, A., Trask, B.J., Hood, L., and Nelson, P.S. (1998). Cloning and characterization of twoToll/Interleukin-1 receptor like genes, TIL3 and TIL4: evidence for a multi-gene receptor family in humans. Blood 91 (11) 4020-4027. [170 citations]
- Choi, K-B., Harlan, J.M., Chaudhary, P.M., Hood, L., and Karsan, A. (1998) Lipopolysaccharide mediates endothelial cell apoptosis by a FADD-dependent pathway. J. Biol. Chem. 273(32) 20185-8. [111 citations]
- Yun, T.J., Chaudhary, P.M., Shu, G.L., Frazer, J.K., Ewings, M.K., Schwartz, S., Pasqual, V., Hood, L., and Clark, E.A. (1998). OPG/FDCR-1, a TNFR family member, is expressed in lymphoid cells and is upregulated by ligating CD40. Journal of Immunology. 161(11) 6113- 6121. [156 citations]
- Law, C-L*, Chaudhary, P.M.,*, Ewings, M*., Solow, S., Marshall, AQ., Hood, L and Clark, E.A. (1999). GrpL, a Grb2-like adaptor protein, is selectively expressed in lymphoid cells and interacts with SLP-76. J. Exp. Med 19;189(8):1243-53. * Co-first authors. [98 citations]
- Chaudhary, P.M., Eby, M., Jasmin, A., and Hood, L. (1999). Activation of the c-Jun N-terminalKinase/Stress activated Protein Kinase pathway by overexpression of Caspase 8 and its homologs. J. Biol. Chem. 274 (27), 19211-19219. [50 citations]
- Chaudhary, P.M., Eby, M., Jasmin, A., Gimmell, A and Hood, L. (1999). Modulation of the NF- κB pathway by virally encoded Death Effector Domains-containing proteins. Oncogene.18(42):5738-46. [178 citations]
- Eby, M.T., Jasmin, A., Kumar, A., Sharma, K., and Chaudhary, P.M. (2000). TAJ, a novel member of the Tumor Necrosis Factor Receptor family, activates the c-Jun N-terminalKinase pathway and mediates caspase-independent cell death. J. Biol Chem. 275 (20), 15336- 15342. [78 citations]
- Chaudhary, P.M., Eby, M., Jasmin, A., Kumar, A., Liu, L., and Hood, L. (2000). Activation of the NF-κB pathway by Caspase 8 and its homologs. Oncogene. 19(39):4451-60. [132 citations]
- Kumar A, Eby MT, Sinha S, Jasmin A, and Chaudhary PM. (2001) Ectodermal dysplasia receptor activates the nuclear factor kappa B, c-Jun N-terminal kinase and cell death pathways and binds to ectodysplasin A. J. Biol Chem. 276 (4) 2668-2677. [102 citations]
- Kumar, A., Jasmin, A., Eby, M.T., and Chaudhary, P.M. (2001). Cytotoxicity of Tumor Necrosis Factor Related Apoptosis-Inducing Ligand Towards Ewing’s Sarcoma cell lines. Oncogene. 20, 1010-1014. [18 citations]
- Taylor, M.A., Chaudhary, P.M., Klem, J., Kumar, V., Schatzle, J.D., and Bennett, M (2001). Inhibition of the death receptor pathway by cFLIP confers partial engraftment of MHC class I- deficient stem cells in perforin-deficient mice. J. Immunology. 167(8):4230-7. [13 citations]
- Shivapurkar, N., Toyooka, S., Eby, T.M., Huang, C.X., Sathyanarayana, U.G., Cunningham, T., Reddy, J.L., Minna, J.D., Chaudhary, P.M. and Gazdar, A.F. (2002) Differential inactivation of caspase 8 in lung cancer. Cancer biology and therapy 1(1) 65-71.
- Liu L, Eby TM, Rathore N, Sinha S and Chaudhary P.M. (2002). The human herpesvirus 8 encoded viral FLICE inhibitory protein physically associates with and persistently activates the IkappaB kinase complex. J. Biol Chem. 277(16):13745-51. [121 citations]
- Harada. K., Toyooka, S., Shivapurkar. N., Maitra. A., Jyotsna L. Reddy, Hittu Matta, Charles F. Timmons, Gail E. Tomlinson, Domenico Mastrangelo, Robert J. Hay, Preet M. Chaudhary and Adi F. Gazdar. (2002) Deregulation of Caspase 8 and 10 expression in Pediatric Tumors and cell lines; Cancer Research; 15;62(20):5897-901. [126 citations]
- Sun, Q., Matta, H and Chaudhary, P.M. (2003) The human herpesvirus 8 encoded viral FLICE inhibitory protein protects against growth factor withdrawal-induced apoptosis via NF- κB activation. Blood. 101(5):1956-61. [55 citations]
- Shivapurkar, N., Toyooka, S., Eby, T.M., Huang, C.X., Sathyanarayana, U.G., Matta, H., Cunningham, T., Reddy, J.L., Minna, J.D., Chaudhary, P.M. and Gazdar, A.F. (2002) Loss of expression of components of Death Inducing Signaling Complex in lung cancer and correlation with Myc expression. Oncogene. 21(55):8510-4. [56 citations]
- Sinha S, Zachariah S, Shindo M, Quinones H and Chaudhary P.M. (2002). Role of TRAF-3 and 6 in the activation of the NF-κB and JNK pathways by X-linked Ectodermal Dysplasia Receptor. J. Biol Chem. 277(47): 44953-44961. [39 citations]
- Matta, H., Gazdar, A.F., and Chaudhary, P.M. (2002). Role of MRIT/cFLIP) in protection against chemotherapy-induced apoptosis. Cancer biology and therapy. 1(6):652-60. [22 citations]
- Kauppila, S., Maaty W, Chen, P., Tomar, R., Eby T.M., Chapo, J., Rathor, N., Zachariah, S., Abrams, J.M. and Chaudhary, P.M. (2003). Eiger and its receptor, Wengen, comprise a TNF- like system in Drosophila. Oncogene. 22(31):4860-7. [83 citations]
- Matta, H., Hozayev, B., Tomar, R., Chugh, P. and Chaudhary, P.M. (2003). Use of Lentiviral vectors for delivery of small interfering RNA. Cancer biology and therapy. 2(2):206-10. [35 citations]
- Tomar, R., Matta, H and Chaudhary, P.M. (2003) Use of adeno-associated viral vector for delivery of small interfering RNA. Oncogene 22(36):5712-5. [100 citations]
- Sun, Q., Zachiriah, S and Chaudhary, P.M. (2003) The human herpesvirus 8 encoded viral FLICE inhibitory protein (vFLIP) induces cellular transformation via NF-κB activation. J. Biol. Chem. 278(52):52437-45. [73 citations]
- Matta, H., Sun, Q., Moses, G. and Chaudhary, P.M. (2003) Molecular genetic analysis of human herpesvirus 8-encoded viral FLICE inhibitory protein (vFLIP)-induced NF-kappa B activation. J. Biol. Chem. 278(52):52406-11. [31 citations]
- Shivapurkar, N., Toyooka, S., Toyooka, K.O., Miyajima, M., Suzuki, M., Shigematsu, H., Takahashi, T., Parikh, G., Reddy, J., Pass, H.I., Chaudhary, P.M., and Gazdar, A.F. (2004) Aberrant Methylation of TRAIL Decoy Receptor genes is Frequent in various tumor types. Int. Journal of Cancer. 109(5):786-92. [100 citations]
- Shindo, M and Chaudhary, P.M. (2004) The Ectodermal Dysplasia Receptor (EDAR) represses the Lef-1/β-catenin dependent transcription independent of NF-κB activation.Biochem. Biophys. Res. Comm. 27;315(1):73-8. [7 citations]
- Chang, B and Chaudhary, P.M. (2004) High level production and one step purification of biologically active Ectodysplasin A1 and A2 immunoadhesins using the baculovirus/insect cell expression system. Protein Expression and Purification. 37(1):162-9. [3 citations]
- Matta, H and Chaudhary, P.M. (2004) Activation of alternative NF-κB pathway by Human herpesvirus 8-encoded viral Fas associated death domain IL-1β converting enzyme inhibitory protein (vFLIP). Proc Natl Acad Sci USA. 101(25): 9399-404. [88 citations]
- Rathore, N, Matta, H and Chaudhary, P.M. (2004). An Evolutionary Conserved Pathway ofNF-κB Activation Involving Caspase-mediated Cleavage and N-end rule Pathway-MediatedDegradation of IκBα. J. Biol. Chem. 279(38):39358-65 [27 citations]
- Sinha, S and Chaudhary, P.M. (2004). Induction of apoptosis by X-linked Ectodermal Dysplasia Receptor via a Caspase 8-dependent mechanism. J. Biol. Chem. 279(40):41873-81.[14 citations]
- Matta, H and Chaudhary, P.M. (2005) The proteasome inhibitor Bortezomib (PS-341) inhibits growth and induces apoptosis in primary effusion lymphoma cells. Cancer biology and therapy. 4(1):77-82 [41 citations]
- Sun, Q, Matta, H and Chaudhary, P.M. (2005) Kaposi’s Sarcoma Associated Herpesvirus- encoded viral FLICE Inhibitory Protein activates transcription from Human Immunodeficiency Virus-1 Long Terminal Repeat via the classical NF-κB pathway. Retrovirology. 15;2(1):9. [15 citations]
- Chugh, P, Matta, H, Schamus, S, Zachariah, S, Kumar, A, Richardson, JA, Smith, AL andChaudhary, P.M. (2005) Constitutive NF-κB activation, normal Fas-induced apoptosis and increased incidence of lymphoma in Human Herpesvirus 8 K13 transgenic mice. Proc Natl Acad Sci USA. 102(36) 12885-12890. [74 citations]
- Sun, Q, Lu, G, Matta, H and Chaudhary, P.M. (2006) Induction of IL-8 expression by Human Herpesvirus 8 encoded vFLIP K13 via NF-κB activation. Oncogene. 25(19):2717-26. [58 citations]
- Matta, H, Surabhi, RM, Zhao J, Punj V, Sun Q, Schamus S, Mazzacurati L, Chaudhary P.M.(2007) Induction of spindle cell morphology in human vascular endothelial cells by human herpesvirus 8-encoded viral FLICE inhibitory protein K13. Oncogene. 26(11):1656-60. [28 citations]
- Lacoste, V., Nicot, C., Gessain, A., Valensi, F., Gabarre, J., Matta, H., Chaudhary, P.M., and Mahieux, R. (2007) In primary effusion lymphoma cells, MYB transcriptional repression is associated with v-FLIP expression during latent KSHV infection while both v-FLIP and v- GPCR become involved during the lytic cycle. British Journal of Hematology. 138(4):487-501.[3 citation]
- Matta, H., Mazzacurati, L., Schamus, S., Sun, and Chaudhary, P.M. (2007) KSHV oncoprotein vFLIP K13 bypasses TRAFs and directly interacts with the IκB kinase complex to selectively activate NF-κB without JNK activation. Journal of Biological Chemistry. 282(34):24858-65. [1 citation]
- Chang, B, Punj, V, Shindo, M and Chaudhary, P.M. (2007) Adenoviral-mediated gene transfer of Ectodysplasin-A2 results in induction of apoptosis and cell cycle arrest in osteosarcoma cell lines. Cancer Gene Therapy. 14(11):927-33. [3 citations]
- Zhao, J, Punj, V., Yang, Y., Mazzacurati, L., Matta, H., Schamus, Yang, T, and Chaudhary, P.M. (2007) Inhibition of KSHV lytic replication and dysregulation of lytic gene expression program by vFLIP K13: a model for lytic replication-induced clonal selection in viral oncogenesis. PLoS ONE. 2(10):e1067. [10 citations]
- Lu, G and Chaudhary, P.M. (2008) Proteasome inhibitor Bortezomib induces cell-cycle arrest and apoptosis in cell lines derived from Ewing's sarcoma family of tumors and synergizes with TRAIL. Cancer Biol Ther. 2008 Jan 11;7(4). [28 citations]
- Habib, AH, Ondeck, CL, Chaudhary, P.M., Bockstaller, MR and McHenry ME. (2008). Evaluation of iron-cobalt/ferrite core-shell nanoparticles for cancer thermotherapy. J Applied Physics 103, 07A307.
- Matta, H., Punj, V, Mazzacurati, L., Schamus, S., Chen, A; Song, R and Chaudhary, P.M.(2008). A Nuclear Role for Kaposi’s Sarcoma Associated Herpesvirus-encoded K13 Protein in NF-κB Activation. Oncogene 27, 5243-53 [ 13 citations]
- Punj, V, Matta, H., Schamus, S., Yang, T, Chang, Y and Chaudhary, P.M. (2009) Induction of CCL20 production by Kaposi’s Sarcoma-associated herpesvirus: role of viral FLICE Inhibitory Protein K13-induced NF-κB activation. Blood, 113(22):5660-8. [11 citations]
- Shuda, M., Arora, R, Kwun, HJ, Feng, H, Sarid, R, Fernandez-Figueras, MT, Tolstov, Y, Gjoerup, O, Mansukhani, MM, Swerdlow, S., Chaudhary, PM., Kirkwood, JM, Nalesnik, M, Kant, JA, Weiss, LM, Chang, Y and Moore, PS (2009). Human Merkel Cell Polyomavirus infection I. MCV T antigen expression in Merkel Cell carcinoma, lymphoid tissues and lymphoid tumors. Int. J. Cancer ,125(6):1243-9. [141 citations]
- Punj, V, Matta, H., Schamus, S., Yang, T and Chaudhary, P.M. (2009). Integrated microarray and multiplex cytokine analyses of Kaposi’s Sarcoma Associated Herpesvirus viral FLICE Inhibitory Protein K13-affected genes in human vascular endothelial cells. BMC Medical Genomics. 6;2:50. [15 citations]
- Liu, R., Li, X., Tulpule, A., Zhou, Y., Scehnet, S., Lee, J-S., Zhang, S, Chaudhary, P.M., Jung, J., and Gill, P. (2010) KSHV induced Notch components render endothelial and mural cell characteristics and cell survival. Blood, 115(4):887-95. [21 citations]
- Punj, V, Matta, H., Schamus, S., Tamewitz, A., Anyang, B. and Chaudhary, P.M. (2010) Kaposi’s sarcoma associated herpesvirus-encoded viral FLICE inhibitory protein (vFLIP) K13 suppresses CXCR4 expression by upregulating miR-146a. Oncogene, 29(12):1835-44.[24 citation]
- Punj, V, Matta, H., and Chaudhary, P.M. (2010) X-linked Ectodermal Dysplasia Receptor (XEDAR) is Down-regulated in Breast Cancer via Promoter Methylation. Clinical Cancer Res. 16(4):1140-8. [3 citations]
- Tolstov, Y.L., Arora, R., Scudiere, S.C., Busam, K., Chaudhary, P.M., Chang, Y and Moore, P.S. (2010) Lack of evidence for direct involvement of Merkel cell polyomavirus (MCV) in chronic lymphocytic leukemia (CLL). Blood. 115(23): 4973-4. [16 citations]
- Liu, R., Gong, M, Li, X., Zhou, Y.,Tulpule, Gao, W., Chaudhary, P.M., Jung, J., and Gill, P.S. (2010) Induction, Regulation and Biological Function of Axl Receptor Tyrosine Kinase in Kaposi’s Sarcoma. Blood, 116(2):297-305. [9 citations]
- Ahmad, A., Groshong, JS, Matta, H., Schamus, S., Punj, V, Robinson, LJ. Gill, P.S. andChaudhary, P.M. (2010) Kaposi’s sarcoma associated herpesvirus-encoded viral FLICE inhibitory protein (vFLIP) K13 cooperates with Myc to promote lymphoma in mice. Cancer Biology & Therapy. 10(10):1033-40. PMCID: PMC3047095. [7 citations]
- Matta, H., Gopalakrishnan, R, Punj, V, Yi, H and Suo, Y and Chaudhary, P.M. (2011) A20 is induced by Kaposi's Sarcoma Associated Herpesvirus encoded viral FLICE Inhibitory Protein (vFLIP) K13 and blocks K13-induced NF-κB in a negative feedback manner. Journal of Biological Chemistry. 286(24):21555-64. PMID:21531730. PMCID: PMC3122214. [5 citations]
- Yang, Y., Groshong, JS., Matta, H., Gopalakrishnan, R, Yi, H and Chaudhary, P.M. (2011) Constitutive NF-kB activation confers IL6 independence and resistance to dexamethasone and Janus Kinase Inhibitor INCB018424 on murine plasmacytoma cell lines. J Biol Chem. 2011 Aug 12;286(32):27988-97. PMCID: PMC3151044, [5 citations]
- Matta, H., Gopalakrishnan, R, Graham, C., Tolani, B., Khanna, A., Yi, H., Suo Y., andChaudhary, PM. (2012) Kaposi's Sarcoma Associated Herpesvirus Encoded viral FLICE Inhibitory Protein K13 Activates NF-κB Pathway Independent of TRAF6, TAK1 and LUBAC. PLoS ONE;7(5):e36601. PMCID: PMC3348130. [5 citations]
- Punj, V, Matta, H and Chaudhary, PM (2012) A Computational Profiling of Changes in Gene Expression and Transcription Factors Induced by vFLIP K13 in Primary Effusion Lymphoma.PLoS ONE, 7(5):e37498. PMCID: PMC3356309. [4 citations]
- Graham, C., Matta, H., Yang, Y., Yi, H., Suo, Y., Tolani, B., and Chaudhary, PM. (2013) Kaposi's sarcoma-associated herpesvirus oncoprotein K13 protects against B cell receptor induced growth arrest and apoptosis through NF-κB activation. J Virology, 87(4) 2242-2252.PMCID: PMC3571451.
- Tolani, B., Gopalakrishnan, R., Punj, V., Matta, H. and Chaudhary, PM. (2014) Targeting Myc in KSHV-associated primary effusion lymphoma with BET bromodomain inhibitors. Oncogene,29;33(22):2928-37. PMID:23792448. [2 citations]
- Gopalakrishnan, R, Matta, H and Chaudhary, PM (2013). A purine scaffold HSP90 inhibitor BIIB021 has selective activity against KSHV-associated Primary Effusion Lymphoma and blocks vFLIP K13-induced NF-κB. Clinical Cancer Research. 19(18):5016-26.PMCID:PMC3804723. [2 citations]
- Tolani, B., Matta, H., Gopalakrishnan, R., Punj, V., and Chaudhary, PM. (2014) NEMO is essential for KSHV-encoded vFLIP K13-induced gene expression and protection against deathreceptor-induced cell death and its N-terminal 251 residues are sufficient for this process. J. Virology. 2014; 88(11):6345-54. PMCID: PMC4093867
- Liu, CC, Tseng, Y-T., Li, W., Wu, C-Y., Mayzus, I., Rzhetsky, A., Sun, F., Waterman, M., Chen, J.J.W., Chaudhary, PM, Loscalzo, J., Crandall, E., and Zhou, XJ (2014) DiseaseConnect: a comprehensive web server for mechanism-based disease–diseaseconnections. Nucleic Acid Research, 2014, 42:W137-46.
- Zhu, H., Lou, S., Zhou, S., Sun, W., Li, L., Warburton, D., He, Q., Jing, Y., Chaudhary, P.M.and Wu, L. (2014) Decrease in phosphorylation of RARαS77 overcomes retinoid-resistanceto induce transcription response inhibiting AML cell growth. (submitted for publication)
- Gopalakrishnan, R., Matta, H., Tolani, B., Triche, T., and Chaudhary, PM. (2014) Immunomodulatory drugs target IKZF1-IRF4-MYC axis in primary effusion lymphoma in acereblon-dependent manner and display synergistic cytotoxicity with BRD4 inhibitors. (submitted for publication)
Review Articles and Commentaries:
- Shivapurkar, N., Reddy J, Chaudhary, P.M. and Gazdar, A.F. (2003). Apoptosis and lung cancer: A review. J. of Cellular Biochemistry. 88(5):885-98
- Chaudhary, P.M. (2003). Death Ligands and Bisindolylmaleimide: A Killer Combination. Cancer biology and therapy
- Moschos SJ, Chaudhary P.M., Kirkwood JM. (2008). Resolving "kinks" of chemotherapy in melanoma. J Natl Cancer Inst. 2008 Jun 18;100(12):833-5.
- Lee HR, Lee S, Chaudhary PM, Gill P, Jung JU. (2010) Immune evasion by Kaposi's sarcoma- associated herpesvirus. Future Microbiol. 2010 Sep;5:1349-65.
Book Chapters
- Chaudhary, P.M. (2004). Death receptors in ectodermal differentiation. In Death receptors in human Cancer. Wafik S. El-Deiry (Ed). Humana Press.
- Chaudhary, P.M. and Nicholas, J (2008). Molecular Biology of HHV-8 Neoplasia. In Human Cancer Viruses. John Nicholas, Kuan-Teh Jeang, and TC Wu (Ed). Basel, Krager.
Patents Granted
- Chaudhary, P.M. and Roninson, I.B. Purification and manipulation of bone marrow and blood cells on the basis of P-glycoprotein expression. US patent # 5,464,753. Assigned to the University of Illinois.
- Chaudhary, P.M. and Roninson, I.B. Purification and manipulation of bone marrow and blood cells on the basis of P-glycoprotein expression. US patent # 5,891,654. Assigned to the University of Illinois.
- Chaudhary, P.M., Shtil, A., and Roninson, I.B. Methods for Preventing Multidrug Resistance in Cancer Cells. U.S. patent 5,972,598. Assigned to the inventors.
- Chaudhary, P.M., and Roninson, I.B. Methods for Preventing Multidrug Resistance in Cancer Cells. WO 94/06938. Assigned to the University of Illinois.
- Chaudhary, P.M. and Hood, L. Proteins capable of regulating NF-kappa B, JNK and apoptosis pathways and methods of using the same. U.S. patent # 06160095. Assigned to the University of Washington/ Stowers Institute for Medical Research.
- Chaudhary, P.M. and Hood, L. Proteins capable of regulating NF-kappa B, JNK and apoptosis pathways and methods of using the same. U.S. patent # 06207458. Assigned to the University of Washington/ Stowers Institute for Medical Research.
- Chaudhary, P.M. Gene expression in ectodermal dysplasia. US patent # 6994961 B1. Assigned to the University of Texas Southwestern Medical Center at Dallas.
Patents Pending
- Chaudhary PM and Gopalakrishnan, R, Compositions and Methods for Treating Primary Effusion Lymphoma. Assigned to the University of Southern California.